Odsek za biokemijo in molekularno biologijo (B)

ČLANKI IN DRUGI SESTAVNI DELI

1.01 Izvirni znanstveni članek

2. Tomaž Bratkovič, Aleš Berlec, Tatjana Popovič, Mojca Lunder, Samo Kreft, Uroš Urleb, Borut Štrukelj, "Engineered staphylococcal protein A's IgG-binding domain with cathepsin L inhibitory activity", Biochem. biophys. res. commun., vol. 34?, no. , [5] str., 2006. [COBISS.SI-ID 1964657]

3. Tomaž Curk, Blaž Zupan, Uroš Petrovič, Gad Shaulsky, "Odkrivanje pravil uravnavanja izražanja genov z razvrščanjem na podlagi pravil", Inform. med. slov. (Print ed.), letn. 11, št. 1, str. 52-59, 2006. [COBISS.SI-ID 5363540]

4. Shin-Rong Hwang, Veronika Stoka, Vito Turk, Vivian Yuan-Wen Ho Hook, "Resistance of cathepsin L compared to elastase to proteolysis when complexed with the serpin endopin 2C and recovery of cathepsin L activity", Biochem. biophys. res. commun., vol. 340, str. 1238-1243, 2006. [COBISS.SI-ID 19535911]

5. Manca Kenig, Saša Jenko, Magda Tušek-Žnidarič, Maruša Pompe Novak, Gregor Gunčar, Dušan Turk, Jonathan P. Waltho, Rosemary A. Staniforth, Franc Avbelj, Eva Žerovnik, "Folding and amyloid-fibril formation for a series of human stefins' chimeras: any correlation?", Proteins, vol. 62, no. 4, str. 918-927, 2006. [COBISS.SI-ID 3428890]

6. Dušan Kordiš, Nika Lovšin, Franc Gubenšek, "Phylogenomic analysis of the L1 retrotransposons in deuterostomia", Syst.Biol., vol. 55, no. 6, str. 886-901, 2006. [COBISS.SI-ID 20498215]

7. Gregor Kosec, Vanina Alvarez, Fernán Agüero, Daniel Sánchez, Marko Dolinar, Boris Turk, Vito Turk, Juan José Cazzulo, "Metacaspases of Trypanosoma cruzi : possible candidates for programmed cell death mediators", Mol. biochem. parasitol., vol. 145, str. 18-28, 2006. [COBISS.SI-ID 19526439]

8. Gregor Kosec, Vanina Alvarez, Juan José Cazzulo, "Cysteine proteinases of Trypanosoma cruzi : from digestive enzymes to programmed cell death mediators", Biocell (Mendoza), vol. 30, no. 3, str. 479-490, 2006. [COBISS.SI-ID 20747559]

9. Petra Kralj, Ana Rotter, Nataša Toplak, Kristina Gruden, Nada Lavrač, Gemma C. Garriga, "Application of closed itemset mining for class labeled data in functional genomics", Inform. med. slov. (Print ed.), letn. 11, št. 1, str. 40-45, 2006. [COBISS.SI-ID 19976999]

10. Marko Mihelič, Cory Teuscher, Vito Turk, Dušan Turk, "Mouse stefins A1 adn A2 (Stfa1 and Stfa2) differentiate between papain-like endo- and exopeptisases", FEBS lett., vol. 580, str. 4195-4199, 2006. [COBISS.SI-ID 20097063]

11. Marko Novinec, Dušan Kordiš, Vito Turk, Brigita Lenarčič, "Diversity and evolution of the thyroglobulin type-1 domain superfamily", Molecular biology and evolution, vol. 23, str. 744-755, 2006. [COBISS.SI-ID 19851815]

12. Nataša Obermajer, Aleš Premzl, Tina Zavašnik-Bergant, Boris Turk, Janko Kos, "Carboxypeptidase cathepsin X mediates ß2 - integrin dependent adhesion of differentiated U-937 cells", Exp. cell res., vol. 312, str. 2515-2527, 2006. [COBISS.SI-ID 1920113]

13. Kristina Orešić, Vanessa Noriega, Laura Andrews, Domenico Tortorella, "A structural determinant of human cytomegalovirus US2 dictates the Down-regulation of class I major histocompatibility molecules", J. biol. chem., vol. 281, str. 19395-19406, 2006. [COBISS.SI-ID 19972135]

14. Uroš Petrovič, "Role of oxidative stress in the extremely salt-tolerant yeast Hortaea werneckii", FEMS yeast research, vol. 6, str. 816-822, 2006. [COBISS.SI-ID 19971879]

15. Aleš Premzl, Vito Turk, Janko Kos, "Intracellular proteolytic activity of cathepsin B is associated with capillary-like tube formation by endothelial cells in vitro", J. cell. biochem., vol. 97, str. 1230-1240, 2006. [COBISS.SI-ID 19783463]

16. Petra Prijatelj, Marlène Charnay, Gabriela Ivanovski, Zala Jenko, Jože Pungerčar, Igor Križaj, Grazyna Faure, "The C-terminal and [Beta]-wing regions of ammodytoxin A, a neurotoxic phospholipase A[sub]2 from Vipera ammodytes ammodytes, are critical for binding to factor Xa and for anticoagulant effect", Biochimie (Paris), vol. 88, str. 69-76, 2006. [COBISS.SI-ID 19435559]

17. Petra Prijatelj, Nina Vardjan, Edward G. Rowan, Igor Križaj, Jože Pungerčar, "Binding to the high-affinity M-type receptor for secreted phospholipases A[sub]2 is not obligatory for the presynaptic neurotoxicity of ammodytoxin A", Biochimie (Paris), vol. 88, str. 1425-1433, 2006. [COBISS.SI-ID 20055079]

18. Jerica Sabotič, Dominik Gaser, Boris Rogelj, Kristina Gruden, Borut Štrukelj, Jože Brzin, "Heterogeneity in the cysteine protease inhibitor clitocypin gene family", Biol. chem. (Print), vol. 387, str. 1559-1566, 2006. [COBISS.SI-ID 20069671]

19. Veronika Stoka, Vito Turk, Dale E. Bredesen, "Differential regulation of the intrinsic pathway of apoptosis in brain and liver during ageing", FEBS lett., vol. 580, str. 3739-3745, 2006. [COBISS.SI-ID 19922983]

20. Boris Turk, "Targeting proteases : successes, failures and future prospects", Nature reviews, Drug discovery, vol. 5, str. 785-799, 2006. [COBISS.SI-ID 20086311]

21. Olga Vasiljeva, (12 avtorjev), "Tumor cell-derived and macrophage-derived cathepsin B promotes progression and lung metastasis of mammary cancer", Cancer res. (Baltimore), vol. 66, str. 5242-5250, 2006. [COBISS.SI-ID 19878951]

22. Steven H. L. Verhelst, Martin D. Witte, Shirin Arastu-Kapur, Marko Fonović, Matthew Bogyo, "Novel aza peptide inhibitors and active-site probes of papain-family cysteine proteases", ChemBioChem, vol. 7, str. 943-950, 2006. [COBISS.SI-ID 20246823]

23. Ljubinka Vitale, Bojana Vukelić, Igor Križaj, "Extracellular metalloendopeptidase of Streptomyces rimosus", Arch. microbiol., vol. 185, str. 183-191, 2006. [COBISS.SI-ID 19738151]

24. Tanja Vranac, Katrina Pretnar-Hartman, Mara Popović, Anja Venturini, Eva Žerovnik, Vladka Čurin-Šerbec, "A single prion protein peptide can elicit a panel of isoform specific monoclonal antibodies", Peptides (N. Y. N.Y., 1980), letn. 27, št. 11, str. 2695-2705, 2006. [COBISS.SI-ID 21714649]

25. Bernd Werle, U... Schanzenbacher, Tamara Lah Turnšek, E... Ebert, B... Julke, W... Ebert, Walter Fiehn, Klaus Kayser, E... Spiess, Magnus Abrahamson, Janko Kos, "Cystatins in non-small cell lung cancer: tissue levels, localization and relation to prognosis", Oncol. Rep., vol. 16, no. 4, str. 647-655, 2006. [COBISS.SI-ID 1974641]

26. Tina Zavašnik-Bergant, Martina Bergant, Matjaž Jeras, Gareth Griffiths, "Different localisation of cystatin C in immature and mature dendritic cells", Radiol. oncol. (Ljubl.), letn. 40, št. 3, str. 183-188, 2006. [COBISS.SI-ID 20249895]

27. Eva Žerovnik, Katja Škerget, Magda Tušek-Žnidarič, Corina Loeschner, Marcus W. Brazier, David R. Brown, "High affinity coppper binding by stefin B (cystatin B) and its role in the inhibition of amyloid fibrillation", Eur. j. biochem., vol. 273, str. 4250-4263, 2006. [COBISS.SI-ID 20069927]

1.02 Pregledni znanstveni članek

2. Nataša Kopitar-Jerala, "The role of cystatins in cells of the immune system", FEBS lett., vol. 580, str. 6295-6301, 2006. [COBISS.SI-ID 20263207]

3. Uroš Petrovič, Mojca Mattiazzi, Tomaž Curk, Blaž Zupan, Igor Križaj, "K orodjem bioinformatike za fenomiko in sistemsko biologijo", Inform. med. slov. (Print ed.), letn. 11, št. 1, str. 66-71, 2006. [COBISS.SI-ID 19977511]

4. Munish Puri, Gregor Gunčar, Boštjan Kobe, (12 avtorjev), "Focusing in on structural genomics : the University of Queensland structural biology pipeline : review", Biomolecular engineering, vol. 23, str. 281-289, 2006. [COBISS.SI-ID 20408359]

5. Tina Zavašnik-Bergant, Boris Turk, "Cysteine cathepsins in the immune response", Tissue antigens, vol. 67, str. 349-354, 2006. [COBISS.SI-ID 19827239]

1.03 Kratki znanstveni prispevek

1.04 Strokovni članek

2. Aleš Premzl, Boris Turk, "Proteaze in njihova vloga pri rakavih obolenjih", Kem. šoli, letn. 18, št. 1, str. 24-29, 2006. [COBISS.SI-ID 19815207]

3. Tina Zavašnik-Bergant, "Skrb za okolje z vidika dela raziskovalca - primer Evropskega laboratorija za molekularno biologijo", Okolj. vzgoja šoli, let. 8, št. 1, str. 18-22, 2006. [COBISS.SI-ID 20510759]

1.05 Poljudni članek

2. Tina Zavašnik-Bergant, "Raziskovalni raj - tudi za Slovence : EMBL - Evropski laboratorij za molekularno biologijo", Delo (Ljubl.), letn. 48, št. 172, str. 19, 27.07.2006. [COBISS.SI-ID 20045607]

3. Tina Zavašnik-Bergant, "Dear EMBL", EMBL &cetera, no. 31, str. 7, 2006. [COBISS.SI-ID 19704871]

4. Tina Zavašnik-Bergant, "Monoklonska protitelesa", Moje zdravje, let. 1, št. 13, str. 8-10, 2006. [COBISS.SI-ID 19869223]

5. Tina Zavašnik-Bergant, "Mikroskopske tehnike - od gojenja celic za produkcijo protiteles do določanja fine strukture celičnih organelov", Novice - IJS (Tisk. izd.), št. 123, str. 11-14, februar 2006. [COBISS.SI-ID 19692071]

6. Tina Zavašnik-Bergant, "Uvajamo metodo rezanja zamrznjenih celic v dušiku", Novice - IJS (Tisk. izd.), št. 125, str. 20-21, maj 2006. [COBISS.SI-ID 19869479]

1.06 Objavljeni znanstveni prispevek na konferenci (vabljeno predavanje)

1.08 Objavljeni znanstveni prispevek na konferenci

2. Tina Zavašnik-Bergant, "Application of immunogold electron microscopy in hybridoma technology and recombinant protein expression", V: Proceedings, [2. hrvatski mikroskopijski kongres s međunarodnim sudjelovanjem] = 2nd Croatian Congress on Microscopy with International participation, May 18-21,2006, Topusko, Croatia, Srećko Gajović, ur., Zagreb, Croatian Society for Electron Microscopy, 2006, str. 186-187. [COBISS.SI-ID 19870247]

3. Tina Zavašnik-Bergant, Martina Bergant, Matjaž Jeras, Gareth Griffiths, "Preparation of cryo sections and quantitative immunogold electron microscopy : a case study on protease inhibitor in immune cells", V: Proceedings, [2. hrvatski mikroskopijski kongres s međunarodnim sudjelovanjem] = 2nd Croatian Congress on Microscopy with International participation, May 18-21,2006, Topusko, Croatia, Srećko Gajović, ur., Zagreb, Croatian Society for Electron Microscopy, 2006, str. 102-103. [COBISS.SI-ID 19869991]

4. Tina Zavašnik-Bergant, Mojca Trstenjak-Prebanda, Vito Turk, "Prednosti elektronske mikroskopije pri označevanju rekombinantnih proteinov z monoklonskimi protitelesi", V: Slovenski kemijski dnevi 2006, Maribor, 21. in 22. september 2006, Peter Glavič, ur., Darinka Brodnjak-Vončina, ur., Maribor, FKKT, 2006, str. 6 str. [COBISS.SI-ID 20155431]

1.12 Objavljeni povzetek znanstvenega prispevka na konferenci

2. Lea Bojič, Ana Petelin, Gabriela Droga-Mazovec, Rok Romih, Veronika Stoka, Vito Turk, Boris Turk, "Involvement of cysteine cathepsins in apoptosis", V: Book of abstracts, 4th Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 22-26, 2006, Gregor Serša, ur., Tamara Lah, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2006, str. 74. [COBISS.SI-ID 19773479]

3. Dejan Caglič, Jerica Rozman Pungerčar, Urška Požgan, Christopher Jedeszko, Mary B. Goldring, Bonnie F. Sloane, Boris Turk, "Potential involvement of lysosomal cysteine cathepsins in arthritis", V: [3rd] Pacific coast protease workshop : April 21 - April 24, 2006, Miracle Springs Resort & Spa, Desert Hot Springs, California, [S. l., s. n.], 2006. [COBISS.SI-ID 20072999]

4. Dejan Caglič, Jerica Rozman Pungerčar, Urška Požgan, Christopher Jedeszko, Mary B. Goldring, Bonnie F. Sloane, Boris Turk, "Proinflammatory cytokines regulate expression of cysteine cathepsin(s) in human chondrocytes", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 48. [COBISS.SI-ID 20121127]

5. Dejan Caglič, Jerica Rozman Pungerčar, Urška Požgan, Christopher Jedeszko, Mary B. Goldring, Bonnie F. Sloane, Boris Turk, "Proinflammatory cytokines regulate expression of cysteine cathepsin(s) in human chondrocytes", V: Thirty-third annual pharmacology research colloquium : Friday, June 16,2006, East Lansing, Michigan State University, 2006, str. S4. [COBISS.SI-ID 20072487]

6. Dejan Caglič, Jerica Rozman Pungerčar, Urška Požgan, Christopher Jedeszko, Bonnie F. Sloane, Boris Turk, "Potential involvement of lysosomal cathepsins ina arthritis", V: 23rd Winter School [on] Proteinases and their Inhibitors, Recent Developments : in Tiers at the Rosengarten, March 1-5,2006, [S.l., s.n.], 2006, str. 21. [COBISS.SI-ID 19801639]

7. Slavko Čeru, Sabina Rabzelj, Gregor Anderluh, Eva Žerovnik, "Human stefin B (cystatin B) oligomers : amyloid-induced toxicity and interaction with membranes", V: Neurodegenerative diseases: molecular mechanisms in a functional genomics framework : program and abstracts : September 6-9, 2006, Berlin, [Germany], Berlin-Buch, MDC.C, 2006, str. 52. [COBISS.SI-ID 20320039]

8. Gabriela Droga-Mazovec, Lea Bojič, Ana Petelin, Urška Repnik, Rok Romih, Veronika Stoka, Vito Turk, Boris Turk, "The anti-apoptotic Bcl-2 homologues are targets of cysteine cathepsins in apoptosis", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 78. [COBISS.SI-ID 20122151]

9. Saška Ivanova, Uroš Gregorc, Lawrence Banks, David S. Bredt, Ron Javier, Rok Romih, Peter Vandenabeele, Vito Turk, Boris Turk, "MAGUKs, scaffolding proteins at cell junctions, as substrates for the caspases and cathepsins during apoptosis", V: Programme & book of abstracts, 14th ECDO Euroconference on Apoptosis [and 3rd Training Course on Conpects and Methods in Programmed Cell Death], September 28-October 4,2006, Chia, Sardinia, Italy, [S. l.], ECDO, 2006, str. L-32. [COBISS.SI-ID 20201767]

10. Saška Ivanova, Uroš Gregorc, Urška Repnik, Lawrence Banks, David S. Bredt, Ron Javier, Rok Romih, Peter Vandenabeele, Vito Turk, Boris Turk, "MAGUKs, scaffolding proteins at cell junctions, as substrates for the caspases and cathepsins during apoptosis", V: 1st Workshop on the immune response against dying tumor cells, [S. l., s. n.], 2006. [COBISS.SI-ID 20413479]

11. Saška Ivanova, Uroš Gregorc, Urška Repnik, Lawrence Banks, David S. Bredt, Ron Javier, Rok Romih, Peter Vandenabeele, Vito Turk, Boris Turk, "MAGUKs, scaffolding proteins at cell junctins, as substrates for the caspases and cathepsins during apoptosis", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 80. [COBISS.SI-ID 20122663]

12. Saša Jenko, Gregor Gunčar, Igor Štern, G. Edward Morgan, Katja Škerget, Sabina Rabzelj, Manca Kenig, Vito Turk, Eva Žerovnik, Dušan Turk, "Structure of cystatin B tetrameter : prolines as switches in amyloid fibril formation", V: Abstract book, 5th Forum of European Neuroscience, Vienna, 8-12 July 2006, [S. l.], FENS, str. 245. [COBISS.SI-ID 19970343]

13. Saša Jenko, Gregor Gunčar, Igor Štern, Gareth J. Morgan, Sabina Rabzelj, Manca Kenig, Vito Turk, Rosemary A. Staniforth, Jonathan P. Waltho, Eva Žerovnik, Dušan Turk, "Amyloids and protein misfolding : proline gates to amyloid structures", V: Abstracts, 20th Symposium of the Protein Society, August 5-9, 2006, San Diego, California, [S. l., s. n.], 2006. [COBISS.SI-ID 20116519]

14. Saša Jenko, Gregor Gunčar, Igor Štern, Gareth J. Morgan, Sabina Rabzelj, Manca Kenig, Vito Turk, Rosemary A. Staniforth, Jonathan P. Waltho, Eva Žerovnik, Dušan Turk, "Stefin B tetrameter : proline gates to amyloid structures", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 30. [COBISS.SI-ID 20115751]

15. Borut Jerman, Matej Butala, Darja Žgur-Bertok, "Ciprofloxacin induced bacteriocin synthesis in Escherichia coli", V: Abstract book : Integrating microbial knowledge into human life, 2nd FEMS Congress of European Microbiologists, Spain, Madrid, July 4 - 8, 2006, Madrid, Spain, FEMS, 2006, str. 297, 2006. [COBISS.SI-ID 1616463]

16. Borut Jerman, Matej Butala, Darja Žgur-Bertok, "Ciprofloxacin induces bacteriocin synthesis in Escherchia coli", V: Genetika 2006 : Book of Abstracts, 4th Congress of Slovenian Genetic Society and 2nd Meeting of the Slovenian Society of Human Genetics with International Participation = IV. Kongres Slovenskega genetskega društva in II. srečanje Slovenskega društva za humano genetiko, z mednarodno udeležbo, September 28th-October 1st, 2006, Biološko središče, Ljubljana, Metka Filipič, ur., Irena Zajc, ur., Ljubljana, Slovensko genetsko društvo, 2006, str. 142. [COBISS.SI-ID 21694937]

17. Špela Klofutar, Klemen Blokar, Primož Pristovšek, Eva Žerovnik, Simona Golič Grdadolnik, "Investigation of structure and dynamics of a chimeric protein between human stefins A and B : [poster]", V: Frontiers of biomolecular NMR : inauguration of the 800 MHz NMR spectrometer, ten years of Slovenian NMR Centre : program and book of abstracts, Cankarjev dom, Culture and Congress Centre, Ljubljana, Slovenia, June 30 - July 1, 2006, Damjan Makuc, ur., Janez Plavec, ur., Ljubljana, NMR Centre, National Institute of Chemistry, 2006, str. 60. [COBISS.SI-ID 3510554]

18. Špela Konjar, Urška Repnik, Joseph Trapani, Vito Turk, Boris Turk, Nataša Kopitar-Jerala, "Towards the identification of the role cathespins in the life cycle of perforin in YT NK cells", V: 1st Workshop on the immune response against dying tumor cells, [S. l., s. n.], 2006. [COBISS.SI-ID 20413735]

19. Špela Konjar, Urška Repnik, Joseph Trapani, Vito Turk, Boris Turk, Nataša Kopitar-Jerala, "A possible role of cathepsins in the activation of perforin in NK cells", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 70. [COBISS.SI-ID 20121895]

20. Špela Konjar, Joseph Trapani, Boris Turk, Nataša Kopitar-Jerala, "Towards identification of the role of cathepsins in the life cycle of perforin", V: 23rd Winter School [on] Proteinases and their Inhibitors, Recent Developments : in Tiers at the Rosengarten, March 1-5, 2006, [S.l., s.n.], 2006, str. 41. [COBISS.SI-ID 19801895]

21. Nataša Kopitar-Jerala, Matthew Bogyo, Boris Turk, Vito Turk, "Lysosomal cysteine cathepsins and inhibitors in activate macrophages", V: Book of abstracts, 1st joint meeting of European national societies of immunology, 16th European congress of immunology, September 6-9, 2006 Paris, Paris, European Federation of Immunological Societies, 2006. [COBISS.SI-ID 20370727]

22. Nataša Kopitar-Jerala, Matthew Bogyo, Boris Turk, Vito Turk, "Lysosomal cysteine cathepsins and stefin B upon classical activation of macrophages and the induction of endotoxin tolerance", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 98. [COBISS.SI-ID 20126503]

23. Nataša Kopitar-Jerala, Matthew Bogyo, Boris Turk, Vito Turk, "Lysosomal cysteine cathepsins and endogenous inhibitors upon classical activation of macrophages and the induction of endotoxin tolerance", V: Immunoregulatory and antimicrobial activities of myeloid cells : [programme & abstracts], Freiburg, EMDS, 2006, str. 73. [COBISS.SI-ID 20370471]

24. Dušan Kordiš, "Where is the root eukaryotes : new insights from retroelement phylogenomics", V: Genomes, evolution, & bioinformatics, 2006 : conference program : May 24-28, 2006, Arizona State University, [S. l.], The Biodesign Institute, Arizona State University, 2006. [COBISS.SI-ID 20229927]

25. Dušan Kordiš, "Enormous impact of retroelements on the genome structure and evolution in land vertebrates : [invited talk]", V: Genomic impact of eukaryotic transposable elements, [S.l., s.n.], 2006, str. 20. [COBISS.SI-ID 19852839]

26. Dušan Kordiš, "Retroelement phylogenomics and the root of eukaryotes : [invited talk]", V: Knjiga povzetkov, 4. slovenski simpozij o rastlinski biologiji z mednarodno udeležbo, Ljubljana, 12.-15. september 2006 = 4th Slovenian Symposium on Plant Biology with International Participation, Ljubljana, September 12-15, 2006, Jasna Dolenc Koce, ur., Dominik Vodnik, ur., Marina Dermastia, ur., Ljubljana, Društvo za rastlinsko fiziologijo Slovenije, = The Slovenian Society of Plant Physiology, 2006, str. 12. [COBISS.SI-ID 20229415]

27. Dušan Kordiš, "Where is the root of eukaryotes : new insights from retroelement phylogenomics", V: Marine genomics : abstracts : an international conference, Sorrento (Italy), October 28 - November 1, 2006, [S. l., s. n.], 2006, str. 23. [COBISS.SI-ID 20292647]

28. Dušan Kordiš, "Retroelement phylogenomics and the root of eukaryotes", V: Phylogenomics conference : program : Sainte-Adéle, Québec, Canada, 15-19 March 2006, [S.l., s.n.], 2006, str. 22. [COBISS.SI-ID 19853095]

29. Gregor Kosec, Vanina Alvarez, Juan José Cazzulo, "The cysteine peptidases of trypanosoma cruzi : insights arising from the genome project", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 18. [COBISS.SI-ID 20204327]

30. Gregor Kosec, Vanina Alvarez, Juan José Cazzulo, Vito Turk, Boris Turk, "Autophagings and ATG8 homologs of Trypanosoma cruzzi : a glimpse into autophagy of an early diverging eukaryote", V: 23rd Winter School [on] Proteinases and their Inhibitors, Recent Developments : in Tiers at the Rosengarten, March 1-5,2006, [S.l., s.n.], 2006, str. 43. [COBISS.SI-ID 19802151]

31. Gregor Kosec, Vanina Alvarez, Vito Turk, Boris Turk, Juan José Cazzulo, "Autophagings and ATG8 homologs of Trypanosoma cruzi : a glimpse into autophagy of an early divergent eukaryote", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 38. [COBISS.SI-ID 20120615]

32. Lidija Kovačič, Jernej Šribar, Igor Križaj, "The sulfo-SBED derivative of ammodytoxin, a photoprobe for studying the molecular basis of phospholipase A[sub]2 [beta]-neurotoxicity", V: Abstract book, 15th World Congress on Animal, Plant and Microbial Toxins, Sunday 23 July to Friday 28 July, 2006, Glasgow, Scotland at the University of Strathclyde, [S. l.], IST, str. 269. [COBISS.SI-ID 20026407]

33. Tomaž Langerholc, Boris Turk, Janko Kos, "The role of two extra cysteines in cystatin F", V: 23rd Winter School [on] Proteinases and their Inhibitors, Recent Developments : in Tiers at the Rosengarten, March 1-5,2006, [S.l., s.n.], 2006, str. 46. [COBISS.SI-ID 19802663]

34. Tomaž Langerholc, Boris Turk, Janko Kos, "Characterization of cystatin F and its possible role in immune system regulation", V: Book of abstracts, 4th Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 22-26, 2006, Gregor Serša, ur., Tamara Lah, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2006, str. 92. [COBISS.SI-ID 19773735]

35. Tomaž Langerholc, Boris Turk, Janko Kos, "The role of two extra cysteines in cystatin F", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 92. [COBISS.SI-ID 20125735]

36. Tomaž Langerholc, Boris Turk, Janko Kos, "The role of two extra cysteins in cystatin F", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 92. [COBISS.SI-ID 2016881]

37. Mojca Mattiazzi, Tomaž Curk, Igor Križaj, Blaž Zupan, Uroš Petrovič, "Combination of mutant and expression data to predict the molecular mechanism of action of perturbations to yeast cells : [invited talk] : [vabljeno predavanje]", V: Genetika 2006 : Book of Abstracts, 4th Congress of Slovenian Genetic Society and 2nd Meeting of the Slovenian Society of Human Genetics with International Participation = IV. Kongres Slovenskega genetskega društva in II. srečanje Slovenskega društva za humano genetiko, z mednarodno udeležbo, September 28th-October 1st, 2006, Biološko središče, Ljubljana, Metka Filipič, ur., Irena Zajc, ur., Ljubljana, Slovensko genetsko društvo, 2006, str. 52. [COBISS.SI-ID 20227111]

38. Mojca Mattiazzi, Uroš Petrovič, Tomaž Curk, A. Jambhekar, Joseph L. DeRisi, Blaž Zupan, Igor Križaj, "Synthetic genetic array analysis a technique for functional genome profiling", V: 6th Meeting of the Slovenian Biochemical Society with International Participation, Lipica, September 21-25, 2005, Janko Kos, ur., Nina Cimerman, ur., Marinka Drobnič-Košorok, ur., Ljubljana, Slovenian Biochemical Society, 2005, str. 162. [COBISS.SI-ID 19849767]

39. Mojca Mattiazzi, Uroš Petrovič, Joseph L. DeRisi, Igor Križaj, "A mammalian phospholipase A[sub]2 in yeast : a global view : [presented at Annual Meeting of Professional Research Scientists "Experimental Biology 2006", April 1 - April 5,2006, San Francisco, California]", FASEB j., vol. 20, str. A952, 2006. [COBISS.SI-ID 19850279]

40. Mojca Mattiazzi, Uroš Petrovič, Jernej Šribar, Andrej Bavdek, Gregor Anderluh, Igor Križaj, "Potential role of 14-3-3 proteins in biological activity of phospolipases A[sub]2", V: 1st Symposium on Lipid and membrane Biology : [March 16-18 2006, Graz, Austria], [Graz], SFB Research Center, 2006, str. 15. [COBISS.SI-ID 19759399]

41. Marko Mihelič, Igor Štern, Cory Teuscher, Vito Turk, Dušan Turk, "Mouse stefins A1 and A2 (Stfa1 and Stfa2) differentiate between papain-like endo- and exopeptidases", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 90. [COBISS.SI-ID 20125479]

42. Gareth J. Morgan, Eva Žerovnik, Jonathan P. Waltho, Rosemary A. Staniforth, "Structural studies on the cystatin amyloid fibril", V: EMBO-FEBS workshop on amyloid formation, Structure, mechanism of formation and cellular efects of amyloid aggregates : 25-28 March 2006, Firenze, Italy : [book of abstracts], [Firenze, Firenze University Press], 2006, str. 118. [COBISS.SI-ID 19797543]

43. Marko Novinec, Antonio Baici, Vito Turk, Brigita Lenarčič, "Interaction between human cathepsins K, L and S and elastins", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 68. [COBISS.SI-ID 20121639]

44. Poh Chee Ong, Sheena McGowan, James A. Irving, Wan-Ting Kan, Sergei A. Grigoryev, Boris Turk, Gary A. Silverman, James C. Whisstock, Robert N. Pike, "DNA selectively accelerates the inhibition of cathepsin V by serpin", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 26. [COBISS.SI-ID 20117287]

45. Kristina Orešić, Boris Turk, Domenico Tortorella, "Proteasome-dependent degradation of TRAM2, a potential regulating factor in the disposal of ER proteins", V: 23rd Winter School [on] Proteinases and their Inhibitors, Recent Developments : in Tiers at the Rosengarten, March 1-5,2006, [S.l., s.n.], 2006, str. 54. [COBISS.SI-ID 19802919]

46. Kristina Orešić, Boris Turk, Domenico Tortorella, "Proteasome-dependant degradation of TRAM2 mediated by HCMV US2 and US11 proteins reveals its potenctial role as regulating factor in the disposal of ER proteins", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 102. [COBISS.SI-ID 20126759]

47. Ana Petelin, Lea Bojič, Gabriela Droga-Mazovec, Rok Romih, Veronika Stoka, Vito Turk, Boris Turk, "The Bcl-2 family members : mediators of cathepsin-induced apoptosis", V: Book of abstracts, 4th Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 22-26, 2006, Gregor Serša, ur., Tamara Lah, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2006, str. 103. [COBISS.SI-ID 19773991]

48. Uroš Petrovič, Mojca Mattiazzi, Tomaž Curk, Ashwini Jambhekar, Heimo Wolinski, Janez Cvetek, Nina Trošt, Sepp D. Kohlwein, Joseph L. DeRisi, Blaž Zupan, Igor Križaj, "Combination of synthetic dosage lethality and gene expression analysis to uncover the mechanisms of activity of a phospholipase A[sub]2", V: Yeast genetics and molecular biology meeting : Princeton University, July 25-30, 2006 : program and abstracts, [S. l., s. n.], 2006, str. 218. [COBISS.SI-ID 20011303]

49. Uroš Petrovič, Mojca Mattiazzi, Janez Cvetek, Zala Jenko, Uroš Logonder, Andrej Bavdek, Lidija Kovačič, Jože Pungerčar, Edward G. Rowan, Franc Anderluh, Igor Križaj, "Genome-wide analysis of the molecular mechanism of action of ammodytoxin, a neurotoxic sPLA[sub]2 in yeast cells : [invited talk]", V: Abstract book, 15th World Congress on Animal, Plant and Microbial Toxins, Sunday 23 July to Friday 28 July, 2006, Glasgow, Scotland at the University of Strathclyde, [S. l.], IST, str. 40. [COBISS.SI-ID 20010535]

50. Uroš Petrovič, Mojca Mattiazzi, Heimo Wolinski, A. Jambhekar, Joseph L. DeRisi, Sepp D. Kohlwein, Igor Križaj, "Pex11 is involved in different pathways leading to peroxisome proliferation in Saccharomyces cerevisiae", V: 1st Symposium on Lipid and membrane Biology : [March 16-18 2006, Graz, Austria], [Graz], SFB Research Center, 2006, str. 18. [COBISS.SI-ID 19759655]

51. Jure Pohleven, Jože Brzin, Borut Štrukelj, "Lectins isolated from mushroom Clitocybe nebularis", V: Book of abstracts, 4th Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 22-26, 2006, Gregor Serša, ur., Tamara Lah, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2006, str. 104. [COBISS.SI-ID 19774247]

52. Aleš Premzl, Janko Kos, "Assessment of cathepsin B activity in tumour invasion and angiogenesis", V: Book of abstracts, 4th Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 22-26, 2006, Gregor Serša, ur., Tamara Lah, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2006, str. 19. [COBISS.SI-ID 19769639]

53. Aleš Premzl, Vito Turk, Janko Kos, "Extracellular and intracellular cathepsin B facilitates tumor progression", V: Cell migration, tissue invasion and disease : EMBO workshop, Capri, Italy, 14-17 October, 2006, Naples, Institute of Fenetics and Biophysics, 2006, str. 71. [COBISS.SI-ID 20255783]

54. Aleš Premzl, Vito Turk, Janko Kos, "Extracellular and intracellular cathepsin B activity in tumor progression", V: Life: Molecular integration & biological diversity : abstracts, 20th IUBMB International Congress of Biochemistry and Molecular Biology and 11th FAOBMB Congress in conjunction with 79th Annual Meeting of the Japanese Biochemical Society and 29th Annual Meeting of the Molecular Biology Society of Japan, June 18-23, 2006, Kyoto, Japan, [S. l.], IUBMB, 2006, str. 695. [COBISS.SI-ID 20001575]

55. Sabina Rabzelj, Gregor Anderluh, Ion Gutierrez-Aguirre, Slavko Čeru, Vito Turk, Eva Žerovnik, "Interaction with membranes and toxicity of prefibrillar oligomers/aggregates of human stefin B wild type in comparison to an EPM1 mutant G4R", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 95. [COBISS.SI-ID 20119591]

56. Sabina Rabzelj, Ion Gutierrez-Aguirre, Gregor Anderluh, Eva Žerovnik, "Membrane binding studies of prefibrillar and oligomeric forms of human stefin B WT and G4R mutant", V: EMBO-FEBS workshop on amyloid formation, Structure, mechanism of formation and cellular efects of amyloid aggregates : 25-28 March 2006, Firenze, Italy : [book of abstracts], [Firenze, Firenze University Press], 2006, str. 128. [COBISS.SI-ID 19797799]

57. Andrej Razpotnik, Igor Križaj, Jernej Šribar, Peter Maček, Tom Turk, "New type of cytolysis and un unusual phospholipase A[sub]2 like protein isolated from the Northern Pacific sea anemone urticina crassicornis", V: Abstract book, 15th World Congress on Animal, Plant and Microbial Toxins, Sunday 23 July to Friday 28 July, 2006, Glasgow, Scotland at the University of Strathclyde, [S. l.], IST, str. 139. [COBISS.SI-ID 20010791]

58. Miha Renko, Saša Jenko, Peter Panjan, Igor Muševič, Dragan Mihailović, Djordje Mandrino, Matjaž Jenko, Dušan Turk, "Cathepsin S bound to the surface retains its full activity", V: 23rd Winter School [on] Proteinases and their Inhibitors, Recent Developments : in Tiers at the Rosengarten, March 1-5,2006, [S.l., s.n.], 2006, str. 58. [COBISS.SI-ID 19803175]

59. Urška Repnik, T. Tilburgs, Barbara J. van der Mast, D. L. Roelen, Humphrey H. H. Kanhai, Frans H. J. Claas, S. Scherjon, "Decidual macrophages in tissue homeostasis and immunoregulation", V: Book of abstracts, Third International Conference on Experimental and Clinical Reproductive Immunobiology, 15-18 November, 2006, Banff, Canada, [S. l., s. n.], 2006. [COBISS.SI-ID 20513575]

60. Jerica Sabotič, Katja Galeša, Tatjana Popovič, Jože Brzin, "Mycocypins, the fungal cysteine proteinase inhibitors, get a new family member", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 94. [COBISS.SI-ID 20125991]

61. Veronika Stoka, Miha Andrejašič, Dušan Kordiš, Dušan Turk, Vito Turk, "Phylogenetic relationship and modeling of human cathepsins O and W", V: Abstracts, RECOMB 2006 Tenth Annual International Conference on Research in Computational Molecular Biology, 2-5 April 2006, Venice, Italy, [S. l., s. n.], 2006, 2 str. [COBISS.SI-ID 20520231]

62. Veronika Stoka, Dale E. Bredesen, "Mechanism of activation and regulation of the intrinsic pathway of apoptosis during brain development and aging", V: Abstract book, 5th Forum of European Neuroscience, Vienna, 8-12 July 2006, [S. l.], FENS, str. 57. [COBISS.SI-ID 20424743]

63. Katja Škerget, Magda Tušek-Žnidarič, Corina Loeschner, David R. Brown, Eva Žerovnik, "Role of copper in the inhibition of amyloid fibrillation by human stefin B (cystatin B)", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 96. [COBISS.SI-ID 20126247]

64. Katja Škerget, Andrej Vilfan, Eva Žerovnik, "Protein concentration effects on the two phases of amyloid-fibril formation by humanoid stefin B", V: 23rd Winter School [on] Proteinases and their Inhibitors, Recent Developments : in Tiers at the Rosengarten, March 1-5,2006, [S.l., s.n.], 2006, str. 68. [COBISS.SI-ID 19801383]

65. Boris Turk, "Cysteine cathepsins pathways to apoptosis : can one use them in cancer treatment?", V: Book of abstracts, 4th Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 22-26, 2006, Gregor Serša, ur., Tamara Lah, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2006, str. 24. [COBISS.SI-ID 19769895]

66. Boris Turk, "Multiple pathways of cysteine cathepsins in cell death", V: Book of abstracts, 5th International Conference on Cysteine Proteinases and their Inhibitors: From Structure to Regulation and Biology, Portorož, Slovenia, September 2-6, 2006, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, Jožef Stefan Institute, 2006, str. 35. [COBISS.SI-ID 20117543]

67. Boris Turk, "Protease signalling : cysteine cathepsins pathways to cell death", V: International Symposium on "Medical and biological perspectives in proteases and their inhibitors" : satellite meeting of the 20th IUBMB Internatinal Congress and 11th FAOBMB Congress, June 25-26,2006, Hyogo, Japan, str. 25. [COBISS.SI-ID 20035623]

68. Olga Vasiljeva, (10 avtorjev), "Cathepsin B derived from both tumor cells and stromal cells from the microenvironment plays critical roles in multiple stages of tumor growth and metastatis : [invited talk]", V: CancerDegradome : abstract book, 3rd annual meeting, 7-9.11.2006, Copenhagen, [S. l., s. n.], 2006. [COBISS.SI-ID 20522791]

69. Olga Vasiljeva, Achim Krüger, Anna Papazoglou, Harald Brodoefel, Matvey Korovin, Kaspar Amholt, Boye S. Nielsen, Christoph Peters, Thomas Reinheckel, "Tumor cell - and macrophage-derived cathepsin B promotes progression and lung metastatis of mammary cancer", V: Book of abstracts, 4th Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 22-26, 2006, Gregor Serša, ur., Tamara Lah, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2006, str. 25. [COBISS.SI-ID 19770663]

70. Olga Vasiljeva, Achim Krüger, Anna Papazoglou, Harald Brodoefel, Matvey Korovin, Christoph Peters, Thomas Reinheckel, "Tumor cell- and macrophage-derived cathepsin B promotes progression and lung metastasis of mammary cancer", V: 23rd Winter School [on] Proteinases and their Inhibitors, Recent Developments : in Tiers at the Rosengarten, March 1-5,2006, [S.l., s.n.], 2006, str. 73. [COBISS.SI-ID 19803431]

71. Brit Wolters, Heiko Büth, Ekkehard Weber, Nataša Kopitar-Jerala, Boris Turk, Petra Boukamp, Klaudia Brix, "Keratinocyte cathepsins B, L and V differ in localization and function", V: International Symposium on "Medical and biological perspectives in proteases and their inhibitors" : satellite meeting of the 20th IUBMB Internatinal Congress and 11th FAOBMB Congress, June 25-26,2006, Hyogo, Japan, str. 12. [COBISS.SI-ID 20035367]

72. Tina Zavašnik-Bergant, Martina Bergant, Gareth Griffiths, "Protease inhibitor cystatin C is differentiation dependent in human dendritic cells", European journal of biochemistry, Supplement, vol. 273, suppl. 1, str. 272, 2006. [COBISS.SI-ID 19977767]

73. Tina Zavašnik-Bergant, Martina Bergant, Gareth Griffiths, "Protease inhibitor cystatin C is differentiation dependent in human dendritic cells", V: FEBS forum for young scientists : [abstract and programme book] : 22-24 June, 2006, Doga Club/Sile, Istanbul, Turkey, [S. l., s. n.], 2006, str. 49. [COBISS.SI-ID 19978279]

74. Tina Zavašnik-Bergant, Martina Bergant, Matjaž Jeras, Gareth Griffiths, "Protease inhibitor cystatin C is differentiation dependent in human dendritic cells", V: Book of abstracts, 1st joint meeting of European national societies of immunology, 16th European congress of immunology, September 6-9, 2006 Paris, Paris, European Federation of Immunological Societies, 2006. [COBISS.SI-ID 20370983]

75. Tina Zavašnik-Bergant, Martina Bergant, Urška Repnik, Gareth Griffiths, Rok Romih, Matjaž Jeras, Janko Kos, Vito Turk, "Microscopic techniques approach in studying protease inhibitor cystatin in immune cells : invited talk", V: Book of abstracts, 4th Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 22-26, 2006, Gregor Serša, ur., Tamara Lah, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2006, str. 36. [COBISS.SI-ID 19770919]

76. Eva Žerovnik, Sabina Rabzelj, Slavko Čeru, Ion Gutierrez-Aguirre, Gregor Anderluh, "Interaction with membranes and toxicity of prefibrillar oligomers/aggregates of human stefin B wild type in comparison to an EPM1 mutant G4R", V: Abstract book, 5th Forum of European Neuroscience, Vienna, 8-12 July 2006, [S. l.], FENS, str. 390. [COBISS.SI-ID 19970599]

1.16 Samostojni znanstveni sestavek ali poglavje v monografski publikaciji

2. Sabina Rabzelj, Eva Žerovnik, "Cystatin B (Stefin B) as the gene whose deffect causes EPM1 syndrome", V: Human stefins and cystatins, Eva Žerovnik, ur., Nataša Kopitar-Jerala, ur., New York, Nova Science Publishers, Inc., 2006, str. 141-152. [COBISS.SI-ID 19871015]

3. Eva Žerovnik, Silva Giannini, Veronika Stoka, Magda Tušek-Žnidarič, Maruša Pompe Novak, Rosemary A. Staniforth, "On the mechanism of amyloid-fibrillation : srefin B as a good model protein", V: Human stefins and cystatins, Eva Žerovnik, ur., Nataša Kopitar-Jerala, ur., New York, Nova Science Publishers, Inc., 2006, str. 97-114. [COBISS.SI-ID 19870759]

4. Eva Žerovnik, Manca Kenig, Jonathan P. Waltho, Rosemary A. Staniforth, "Conclusions on the mechanism of protein folding from stefins and cystatins studies", V: Human stefins and cystatins, Eva Žerovnik, ur., Nataša Kopitar-Jerala, ur., New York, Nova Science Publishers, Inc., 2006, str. 61-74. [COBISS.SI-ID 19870503]

1.22 Intervju

MONOGRAFIJE IN DRUGA ZAKLJUČENA DELA

2.08 Doktorska disertacija

IZVEDENA DELA (DOGODKI)

3.14 Predavanje na tuji univerzi

2. Aleš Premzl, Antibodies as research, diagnostic and therapeutic tools : from antibody-based immunoassays to biological drugs : [invited lecture], Tuzla, University of Tuzla, Faculty of Pharmacy, 12 July 2006. [COBISS.SI-ID 19983655]

3. Boris Turk, Cysteine cathepsins and their signaling to apoptosis : invited talk, Freiburg, Germany, Institüt für Molekulare Medizin und Zellforschung der Albert-Ludwigs-Universität, 13 Feb.2006. [COBISS.SI-ID 19768871]

4. Boris Turk, Lysosomal cysteine proteases : structural features and their role in apoptosis : invited talk, Tokyo Metropolitan Institute of medical Science, Department of Enzymatic Regulation for Cell Functions, Tokyo, 30 June 2006. [COBISS.SI-ID 20029991]

5. Boris Turk, Protease signaling : cysteine cathepsins pathways to cell death : invited talk, Orsay, France, Université Paris-Sud, 23 Oct. 2006. [COBISS.SI-ID 20283431]

6. Dušan Turk, MAIN 2006 : initial model generatin, sidechain generation, multi-crystal averaging and refinement : invited talk, Berlin, Max-Delbrück-Centrum für Molekulare Medizin, 28 April, 2006. [COBISS.SI-ID 19842087]

7. Vito Turk, Cysteine cathepsins : biological role and activity regulation : invited talk, New York, State University of New York, Department of Biochemistry and Cell Biology, 26 Oct. 2006. [COBISS.SI-ID 20487975]

8. Vito Turk, Protease interfaces with protein substrates : interacting domains required for proteolysis? : invited talk, San Diego, University of California, Skaggs School of Pharmacy and Pharmaceutical Sciences, 23 Oct. 2006. [COBISS.SI-ID 20487719]

9. Tina Zavašnik-Bergant, A view into the nano world of cell organells : [invited lecture], Tuzla, University of Tuzla, Faculty of Pharmacy, 12 July 2006. [COBISS.SI-ID 19978535]

10. Eva Žerovnik, Amyloidogenesis of human stefin B (cystatin B) : invited talk, London, MRC Centre for Neurodegeneration Research, Neuroscience King's College, Institute of Psychiatry, 11 Sept. 2006. [COBISS.SI-ID 20178471]

11. Eva Žerovnik, Studies of amyloid fibril formation and amyloid-induced toxicity by human stefin B (cystatin B) : a gene causing EPM1 : invited talk, Nottingham, Univeristy of Nottingham, Faculty of Medicine and Health Sciences, School of Biomedical Sciences, 24 Aug. 2006. [COBISS.SI-ID 20178727]

3.15 Prispevek na konferenci brez natisa

3.16 Vabljeno predavanje na konferenci brez natisa

2. Boris Turk, Protease signaling : the first cut is the deepest : presented at Pacific Coast protease workshop, 21-24 April, 2006, Hot Spring, California, 2006. [COBISS.SI-ID 20031527]

3. Vito Turk, Lysosomal cysteine cathepsins : facts and opportunities : presented at Congress of the EMBO, Croatian Society of Biochemistry and Molecular Biology on the occasion of the 30th Anniversary, 3-7 October, 2006, Vodice, Croatia, 2006. [COBISS.SI-ID 20488231]

4. Vito Turk, Lysosomal cysteine peptidase : regulation, mechanism of action and their role in apoptosis : plenary lecture presented at 27th Latin American Congress on Chemistry, 6th International Congress on Chemistry and Chemical Engineering, 16-20 October, 2006, Havana, Cuba, 2006. [COBISS.SI-ID 20488487]

3.25 Druga izvedena dela

SEKUNDARNO AVTORSTVO

Urednik

2. Eva Žerovnik, ur., Nataša Kopitar-Jerala, ur., Human stefins and cystatins, New York, Nova Science Publishers, Inc., 2006. [COBISS.SI-ID 19866151]

Mentor pri doktorskih disertacijah

2. Primož Meh, Izražanje in biokemijska karakterizacija tiroglobulinskih domen tipa 1 testikana in nidogenov : doktorska disertacija, Ljubljana, [P. Meh], 2006. [COBISS.SI-ID 2970132]

3. Kristina Orešić, HCMV mediated retrograde transport of proteins from the endoplasmic reticulum to the cytosol : doctoral thesis : doktorska disertacija, Ljubljana, [K. Orešić], 2006. [COBISS.SI-ID 227823872]

4. Sabina Rabzelj, Amiloidna fibrilacija in interakcija z lipidnimi membranami človeškega stefina B in izbranih mutant in vitro : doktorska disertacija : doctoral dissertation, (Biotehniška fakulteta, Oddelek za živilstvo, Ljubljana, Doktorske disertacije, 140), Ljubljana, [S. Rabzelj], [BF, Podiplomski študij bioloških in biotehniških znanosti: znanstveno področje biotehnologija], 2006. [COBISS.SI-ID 3228024]