Odsek za biokemijo in molekularno biologijo (B)

ČLANKI IN DRUGI SESTAVNI DELI

1.01 Izvirni znanstveni članek

2. Mateja Cegnar, Aleš Premzl, Tina Zavašnik-Bergant, Julijana Kristl, Janko Kos, "Poly(lactide-co-glycolide) nanoparticles as a carrier system for delivering cysteine protease inhibitor cystatin into tumor cells", Exp. cell res., vol. 301, no. 1, str. 223-231, 2004. [COBISS.SI-ID 1608305]

3. Tina Cirman, Kristina Orešić, Gabriela Droga-Mazovec, Vito Turk, John C. Reed, Richard M. Myers, Guy S. Salvesen, Boris Turk, "Selective disruption of lysosomes in HeLa cells triggers apoptosis mediated by cleavage of bid by multiple papain-like lysosomal cathepsins", J. biol. chem., vol. 279, str. 3578-3587, 2004. [COBISS.SI-ID 18033959]

4. Tadej Čepeljnik, Igor Križaj, Romana Marinšek-Logar, "Isolation and characterization of the Pseudobutyrivibrio xylanivorans Mz5 xylanase XynT - the first family 11 endoxylanase from rumen Butyrivibrio-related bacteria", Enzyme microb. technol., letn. 34, št. 3/4, str. 219-227, 2004. [COBISS.SI-ID 1492616]

5. Tamara Čimbora, Sergeja Bombek, Janez Košmrlj, Lidija Kovačič, Slovenko Polanc, Ana Katalinić, Maja Osmak, "Development of potential anti-cancer agents : diazenes and derivatives", Drug dev. res., vol. 61, no. 2, str. 95-100, 2004. [COBISS.SI-ID 25768197]

6. Saša Čučnik, Igor Križaj, Blaž Rozman, Tanja Kveder, Borut Božič, "Concomitant isolation of protein C inhibitor and unnicked [Beta][sub]2-glycoprotein I", Clin Chem Lab Med, vol. 42, str. 171-174, 2004. [COBISS.SI-ID 18108967]

7. Saša Čučnik, Tanja Kveder, Igor Križaj, Blaž Rozman, Bojan Božič, "High avidity anti-[beta]2-glycoprotein I antibodies in patients with antiphospholipid syndrome", Ann. Rheum. Dis., vol. 63, str. 1478-1482, 2004. [COBISS.SI-ID 18578727]

8. Marko Fonović, Dieter Brömme, Vito Turk, Boris Turk, "Human cathepsin F : expression in baculovirus system, characterization and inhibition by protein inhibitors", Biol. chem. (Print), vol. 385, str. 505-509, 2004. [COBISS.SI-ID 18274599]

9. Katja Galeša, Richard M. Thomas, Marjetka Kidrič, Roger H. Pain, "Clitocypin, a new cysteine proteinase inhibitor, is monomeric : impact on the mechanism of folding", Biochem. biophys. res. commun., vol. 324, str. 576-578, 2004. [COBISS.SI-ID 18555431]

10. Benjamin Gorinšek, Franc Gubenšek, Dušan Kordiš, "Evolutionary genomics of chromoviruses in Eukaryotes", Molecular biology and evolution, vol. 21, str. 781-798, 2004. [COBISS.SI-ID 18458663]

11. Kristina Gruden, Anja G. J. Kuipers, Gregor Gunčar, Nina Slapar, Borut Štrukelj, Maarten A. Jongsma, "Molecular basis of Colorado potato beetle adaptation to potato plant defence at the level of digestive cysteine proteinases", Insect biochem. mol. biol., 34, str. 365-375, 2004. [COBISS.SI-ID 1366863]

12. Chelsee Hewitt, Dušan Turk, Igor Štern, (13 avtorjev), "The role of cathepsin C in Papillon-Lefèvre syndrome, prepubertal periodontitis, and aggressive periodontitis", Human Mutat, vol. 23, str. 222-228, 2004. [COBISS.SI-ID 18213671]

13. Bara Hieng, Kristina Ugrinović, Jelka Šuštar-Vozlič, Marjetka Kidrič, "Different classes of proteases are involved in the response to drought of Phaseolus vulgaris L. cultivars differing in sensitivity", J. plant physiol., vol. 161, str. 519-530, 2004. [COBISS.SI-ID 18432039]

14. Gabriela Ivanovski, Toni Petan, Igor Križaj, Michael H. Gelb, Franc Gubenšek, Jože Pungerčar, "Basic amino acid residues in the[beta]-structure region contribute, but not critically, to presynaptic neurotoxicity of ammodytoxin A", Biochimica et biophysica acta, Proteins and proteomics, vol. 1702, str. 217-225, 2004. [COBISS.SI-ID 18557223]

15. Saša Jenko, Miha Škarabot, Manca Kenig, Gregor Gunčar, Igor Muševič, Dušan Turk, Eva Žerovnik, "Different propensity to form amyloid-fibrils by two homologous proteins - human stefins A and B : searching for an explanation", Proteins, vol. 55, str. 417-425, 2004. [COBISS.SI-ID 18175527]

16. Manca Kenig, Selma Berbić, Aida Kriještorac, Louise Kroon Žitko, Magda Tušek-Žnidarič, Maruša Pompe Novak, Eva Žerovnik, "Differences in aggregation properties of three site-specific mutants of recombinant human stefin B", Protein sci., vol. 13, str. 63-70, 2004. [COBISS.SI-ID 18040359]

17. Blaž Kralj, Janez Ščančar, Igor Križaj, Miha Benedik, Peter Bukovec, Radmila Milačič, "Determination of high molecular mass Al species in serum and spent CAPD fluids of dialysis patients combining SEC and anion-exchange FPLC with ETAAS detection", J. anal. at. spectrom., vol. 19, str. 101-106, 2004. [COBISS.SI-ID 17963559]

18. Ju-Hyun Lee, Boris Rogelj, (8 avtorjev), "The neuronal adaptor protein X11[beta] reduces amyloid [beta]-protein levels and amyloid plaque formation in the brains of transgenic mice", J. biol. chem., vol. 19, str. 49099-49104, 2004. [COBISS.SI-ID 18835751]

19. Nataša Mehle, Maja Kovač, Nataša Petrovič, Maruša Pompe Novak, Špela Baebler, Hana Krečič Stres, Kristina Gruden, Maja Ravnikar, "Spread of potato virus Y[sub]NTN in potato cultivars (Solanum tuberosum L.) with different levels of sensitivity", Physiol. mol. plant pathol., vol. 64, str. 293-300, 2004. [COBISS.SI-ID 1471311]

20. Uroš Petrovič, Jernej Šribar, Alenka Pariš, Marjan Rupnik, Mojca Kržan, Nina Vardjan, Franc Gubenšek, Robert Zorec, Igor Križaj, "Ammodytoxin, a neurotoxic secreted phospholipase A[sub]2 can act in the cytosol of the nerve cell", Biochem. biophys. res. commun., vol. 324, str. 981-985, 2004. [COBISS.SI-ID 18531623]

21. A. Rabossi, Veronika Stoka, Vida Puizdar, Vito Turk, L. A. Quesada-Allue, "Novel aspartyl proteinase associated to fat body histolysis during ceratitis capitata early metamorphosis", Arch. insect biochem. physiol., vol. 57, str. 51-67, 2004. [COBISS.SI-ID 18685735]

22. Tadeja Režen, Nataša Debeljak, Dušan Kordiš, Damjana Rozman, "New aspects on lanosterol 14[alpha]-dimethylase and cytochrome P450 evolution : lanosterol/cycloartenol diversification and lateral transfer", J. mol. evol., vol. 59, str. 51-58, 2004. [COBISS.SI-ID 18458919]

23. Boris Rogelj, Karl Peter Giese, "Expression and function of brain specific small RNAs", Rev. neurosci., vol. 15, str. 185-198, 2004. [COBISS.SI-ID 18835495]

24. Andrea Rossi, Quinn Deveraux, Boris Turk, Andrej Sali, "Comprehensive search for cysteine for cathepsins in the human genome", Biol. chem. (Print), vol. 385, str. 363-372, 2004. [COBISS.SI-ID 18223655]

25. Igor Štern, Norbert Schaschke, Luis Moroder, Dušan Turk, "Crystal structure of NS-134 in complex with bovine cathepsin B : a two-headed epoxysuccinyl inhibitor extends along the entire active-site cleft", Biochem. j. (Lond., 1984), vol. 381, str. 511-517, 2004. [COBISS.SI-ID 18604327]

26. Nataša Toplak, Veronika Okršlar, Darja Stanič Racman, Kristina Gruden, Jana Žel, "A high-throughput method for quantifying transgene expression in transformed plants with real-time PCR analysis", Plant. mol. biol. report., vol. 22, str. 237-250, 2004. [COBISS.SI-ID 1471823]

27. Tina Zavašnik-Bergant, Ana Schweiger, Tadeja Bevec, Rastko Golouh, Vito Turk, Janko Kos, "Inhibitory p41 isoform of invariant chain and its potential target enzymes cathepsins L and H in distinct population of macrophages in human lymph nodes", Immunology (Oxf.), vol. 112, str. 378-385, 2004. [COBISS.SI-ID 18326823]

1.03 Kratki znanstveni prispevek

1.06 Objavljeni znanstveni prispevek na konferenci (vabljeno predavanje)

2. Jana Žel, Katarina Cankar, Kristina Gruden, "Metodologija ugotavljanja gensko spremenjenih organizmov", V: Varnost živil, 22. Bitenčevi živilski dnevi 2004 = 22nd Food Technology Days 2004 dedicated to prof. F. Bitenc, 18. in 19. marec 2004, Radenci, Lea Gašperlin, ur., Božidar Žlender, ur., Ljubljana, Biotehniška fakulteta, Oddelek za živilstvo, 2004, str. 117-127. [COBISS.SI-ID 2899320]

1.07 Objavljeni strokovni prispevek na konferenci (vabljeno predavanje)

1.08 Objavljeni znanstveni prispevek na konferenci

2. Slavko Čeru, Sabina Rabzelj, Nataša Kopitar-Jerala, Eva Žerovnik, "Protein level of familial Unverricht-Lundborg disease", V: Kognitivna znanost : zbornik A 7. mednarodne multi-konference Informacijska družba IS 2004, 9. do 15. oktober 2004 : proceedings A of the 7th International Multi-Conference Information Society IS 2004, 9-15th October 2004, Ljubljana, Slovenia, (Informacijska družba), Andrej Ule, ur., Matjaž Gams, ur., Grega Repovš, ur., Ljubljana, Institut "Jožef Stefan", 2004, str. 85-88. [COBISS.SI-ID 18567719]

3. Saša Jenko, Gregor Gunčar, Manca Kenig, Dušan Turk, Eva Žerovnik, "How do stefins form amyloid fibrils? : from a structural point of view", V: Kognitivna znanost : zbornik A 7. mednarodne multi-konference Informacijska družba IS 2004, 9. do 15. oktober 2004 : proceedings A of the 7th International Multi-Conference Information Society IS 2004, 9-15th October 2004, Ljubljana, Slovenia, (Informacijska družba), Andrej Ule, ur., Matjaž Gams, ur., Grega Repovš, ur., Ljubljana, Institut "Jožef Stefan", 2004, str. 78-80. [COBISS.SI-ID 18567207]

4. Lucia Sacchi, Riccardo Bellazzi, Paolo Magni, Tomaž Curk, Uroš Petrovič, Blaž Zupan, "Clustering gene expression data with temporal abstractions", V: MedInfo 2004 : September 7-11,2004, San francisco, USA, (Studies in health technology and informatics, v. 107), Amsterdam, IOS Press, 2004, str. 798-802. [COBISS.SI-ID 18816551]

5. Mark Stanojević, Nika Lovšin, Franc Gubenšek, Marta Logar, Jože Kotnik, Darija Gibičar, Milena Horvat, "Mercury detoxification genes in river water contaminated by the past mercury mining activity in Idrija, Slovenia", V: Mercury as a global pollutant : [presented at 7th International Conference on Mercury as a Global Pollutant, 27 June - 2 July, 2004, Ljubljana, Slovenia], (RMZ - Materials and geoenvironment, Vol. 51, no. 1-3, 2004, Letn. 51, št. 1-3, 2004), Milena Horvat, ur., Nives Ogrinc, ur., Jadran Faganeli, ur., Jože Kotnik, ur., Ljubljana, Naravoslovnotehniška fakulteta, Inštitut za rudarstvo, geotehnologijo in okolje, zv. 2, str. 1388-1391. [COBISS.SI-ID 215977216]

6. Veronika Stoka, Claudia Stoka, Manuel Hepner, Eva Žerovnik, "Molecular and cellular processes in neurodegeneration : clinical aspects", V: Kognitivna znanost : zbornik A 7. mednarodne multi-konference Informacijska družba IS 2004, 9. do 15. oktober 2004 : proceedings A of the 7th International Multi-Conference Information Society IS 2004, 9-15th October 2004, Ljubljana, Slovenia, (Informacijska družba), Andrej Ule, ur., Matjaž Gams, ur., Grega Repovš, ur., Ljubljana, Institut "Jožef Stefan", 2004, str. 81-84. [COBISS.SI-ID 18567463]

7. Veronika Stoka, Eva Žerovnik, "Molecular and cellular processes in neurodegeneration; a central role for protein aggregation", V: Kognitivna znanost : zbornik A 7. mednarodne multi-konference Informacijska družba IS 2004, 9. do 15. oktober 2004 : proceedings A of the 7th International Multi-Conference Information Society IS 2004, 9-15th October 2004, Ljubljana, Slovenia, (Informacijska družba), Andrej Ule, ur., Matjaž Gams, ur., Grega Repovš, ur., Ljubljana, Institut "Jožef Stefan", 2004, str. 75-77. [COBISS.SI-ID 18566951]

1.12 Objavljeni povzetek znanstvenega prispevka na konferenci

2. Lea Bojič, Ana Petelin, Gabriela Droga-Mazovec, Veronika Stoka, Nataša Kopitar-Jerala, Guy Salvesen, Vito Turk, Boris Turk, "Cysteine cathepsins : pathways to apoptosis", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 31. [COBISS.SI-ID 18468647]

3. Lea Bojič, Ana Petelin, Gabriela Droga-Mazovec, Veronika Stoka, Vito Turk, Boris Turk, "Proapoptotic Bcl-2 homologue Bid is an important mediator of lysosomal protease-induced apoptosis in SH-SY5Y cells", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004. [COBISS.SI-ID 18481959]

4. Lea Bojič, Ana Petelin, Gabriela Droga-Mazovec, Veronika Stoka, Vito Turk, Boris Turk, "Proapoptotic Bcl-2 homologue Bid is an important mediator of lysosomal protease-induced apoptosis in SH-SY5Y cells", V: Program and book of abstracts, 12th ECDO Euroconference on Apoptosis, September 17-20, Chania, Greece, [S.l.], ECDO, 2004, str. P-13. [COBISS.SI-ID 18760999]

5. Dejan Caglič, Tjaša Kumelj, Jerica Rozman Pungerčar, Gunnar Pejler, Boris Turk, "Glycosaminoglycans can accelerate processing of human recombinant procathepsin B in vitro", V: 21st Winter School on Proteinases and their Inhibitors, Recent Developments : in Tiers, 25th-29th February, 2004, [S.l., s.n.], 2004, str. 18. [COBISS.SI-ID 18128167]

6. Dejan Caglič, Tjaša Kumelj, Jerica Rozman Pungerčar, Gunnar Pejler, Boris Turk, "Involvement of glycosaminoglycans in processing of procathepsin B in vitro", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 71. [COBISS.SI-ID 18474791]

7. Mateja Cegnar, Aleš Premzl, Tina Zavašnik-Bergant, Julijana Kristl, Janko Kos, "Passive targeting of cysteine protease inhibitor cystatin into tumour cells byusing poly (lactide-co-glycoide) nanoparticles", V: Symposium of Pharmaceutical Biotechnology, 25. - 28. April 2004 under the auspices of the European organisations, Trieste - Italy : contributions to the symposium, [S.l., s.n.], 2004, 1 [f.]. [COBISS.SI-ID 1492081]

8. Tanja Dreo, Katarina Cankar, D. Štebih, Kristina Gruden, Maja Ravnikar, Jana Žel, "Real-time PCR : accuracy of GMO quantification", V: Symposium abstracts - poster presentations, 1st International qPCR Symposium & Application Workshop, 3rd-6th March 2004 in Freising-Weihenstephan, 2004, str. 31-32. [COBISS.SI-ID 17690585]

9. Marko Fonović, Dieter Brömme, Vito Turk, Boris Turk, "Human cathepsin F : expression in baculovirus system, characterization and inhibition by protein inhibitors", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, vol. 385, str. 76, 2004. [COBISS.SI-ID 18477607]

10. Uroš Gregorc, Saška Ivanova, Lawrence Banks, Vito Turk, Boris Turk, "Cleavage of MAGUKs family proteins during apoptosis", V: 21st Winter School on Proteinases and their Inhibitors, Recent Developments : in Tiers, 25th-29th February, 2004, [S.l., s.n.], 2004, str. 32. [COBISS.SI-ID 18128423]

11. Gregor Gunčar, Marko Mihelič, Dušan Turk, "Is excluded interaction between cathepsin S and inhibitory fragment of p41 form of invariant chain confined only to humans?", V: 29th FEBS Congress : 26 June - 1 July 2004, Warsaw, Poland, [S.l.], The Polish Biochemical Society, 2004. [COBISS.SI-ID 18483239]

12. Saška Ivanova, Uroš Gregorc, Lawrence Banks, David S. Bredt, Vito Turk, Boris Turk, "Members of the MAGUK family are substrates for the executioner caspases", V: 22st Winter School on Proteinases and their Inhibitors, Recent Developments : in Tiers (und St. Zyprian) at the Rosengarten, March 2-6,2005, [S.l., s.n.], 2005, str. 38. [COBISS.SI-ID 18883623]

13. Saška Ivanova, Uroš Gregorc, Lawrence Banks, David S. Bredt, Vito Turk, Boris Turk, "Role of MAGUKs in apoptosis", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 109. [COBISS.SI-ID 18482215]

14. Saška Ivanova, Uroš Gregorc, Lawrence Banks, David S. Bredt, Vito Turk, Boris Turk, "Role of MAGUKs in apoptosis", V: Program and book of abstracts, 12th ECDO Euroconference on Apoptosis, September 17-20, Chania, Greece, [S.l.], ECDO, 2004, str. P-75. [COBISS.SI-ID 18498087]

15. Gabriela Ivanovski, Toni Petan, Igor Križaj, Igor Križaj, Franc Gubenšek, Jože Pungerčar, "Basic amino acid residues in the[beta]-structure region contribute, but not critically, to presynaptic neurotoxicity of ammodytoxin A", V: 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, Marko Dolinar, ur., Igor Križaj, ur., Peter Maček, ur., Ljubljana, Jožef Stefan Institute, 2004, str. 64. [COBISS.SI-ID 18294567]

16. Saša Jenko, Miha Škarabot, Manca Kenig, Gregor Gunčar, Igor Muševič, Dušan Turk, Eva Žerovnik, "Different propensity to form amyloid-fibrils by stefins A and B", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 86. [COBISS.SI-ID 18478375]

17. Silvia Jordans, Saša Jenko, Bianca Friedrichs, Dieter Brömme, Klaudia Brix, "Extracellular action of cathepsins in the thyroid gland", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. [COBISS.SI-ID 18477863]

18. Marjetka Kidrič, Kristina Ugrinović, Bara Hieng, Jelka Šuštar-Vozlič, Branka Stevanović, "Serine protease(s) and aminopeptidases are involved in the response to water deficit of homoiohydric and poikilohydric plants : presented at 14th FESPB Congress, August 23-27,2004, Cracow, Poland", Acta physilogiae plantarum, vol. 26, no. 3, suppl., str. 195, 2004. [COBISS.SI-ID 18431783]

19. Nataša Kopitar-Jerala, Ana Schweiger, R. Myers, Vito Turk, Boris Turk, "Induction of apoptosis in the thymocytes of stefin B deficient mice", V: 12th International Congress of Immunology and 4th Annual Conference of FOCIS : July 18-23,2004, Motréal, Québec, Canda : program, [S.l.], FOCIS, 2004. [COBISS.SI-ID 18817319]

20. Nataša Kopitar-Jerala, Vito Turk, Boris Turk, "Stefin B co-immunoprecipitates with histones in T98G astrocytoma cell line", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 88. [COBISS.SI-ID 18479143]

21. Dušan Kordiš, "Phylogenomic analysis of retrotransposons in deurerostomia", V: Abstracts, 8th Evolutionary Biology Meeting at Marseilles, September, 22nd-24th 2004, Marseilles, [S.l.], European Science Foundation, 2001. [COBISS.SI-ID 18841639]

22. Dušan Kordiš, "Phylogenomic analysis of chromoviruses", V: International Workshop on Structural approaches to sequence evolution: molecules, networks, populations : July 5-10,2004, Dresden, Germany, Dresden, Max-Planck-Institut für Physik Komplexer Systeme, 2004. [COBISS.SI-ID 18841383]

23. Dušan Kordiš, "Evolutionary genomics of chromiviruses in eukaryotes", V: Molecular mechanisms of transposition, its regulation and evolution : EMBO workshop, June 26-30, 2004, Roscoff, France, [S.l., s.n.], 2004. [COBISS.SI-ID 18841127]

24. Dušan Kordiš, Franc Gubenšek, "Evolutionary genomics of the phospolipase A[sub]2 superfamily", V: 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, Marko Dolinar, ur., Igor Križaj, ur., Peter Maček, ur., Ljubljana, Jožef Stefan Institute, 2004, str. 15. [COBISS.SI-ID 18360103]

25. Gregor Kosec, Vanina Alvarez, Fernán Agüero, Daniel Sánchez, Marko Dolinar, Boris Turk, Vito Turk, Juan José Cazzulo, "Metacaspases of trypanosoma cruzi : possible candidates for programmed cell death mediators of protozon parasite", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 106. [COBISS.SI-ID 18481703]

26. Gregor Kosec, Vanina Alvarez, Fernán Agüero, Daniel Sánchez, Boris Turk, Vito Turk, Juan José Cazzulo, "Metacaspases of trypanosoma cruzi : possible candidates for programmed cell death meadiators of protozoan parasite", V: Program and book of abstracts, 12th ECDO Euroconference on Apoptosis, September 17-20, Chania, Greece, [S.l.], ECDO, 2004, str. P-88. [COBISS.SI-ID 20211495]

27. Gregor Kosec, Vanina Alvarez, Fernán Agüero, Daniel Sánchez, Boris Turk, Vito Turk, Juan José Cazzulo, "Metacaspases of trypanosoma cruzi : possible candidates for programmed cell death mediators of protozon parasite", V: Program and book of abstracts, 12th ECDO Euroconference on Apoptosis, September 17-20, Chania, Greece, [S.l.], ECDO, 2004, str. P-89. [COBISS.SI-ID 20204583]

28. Igor Križaj, Jože Pungerčar, Franc Gubenšek, "Presynaptic neurotoxicity of ammodytoxin", V: Final program and abstracts book, 2nd International Conference Phospholipases A[sub]2 & 8th International Congress Platelet-Activating Factor and Related Lipid Mediators, October 6-9,2004, Berlin, Germany, [S.l., s.n.], 2004, str. 151. [COBISS.SI-ID 18575911]

29. Igor Križaj, Jože Pungerčar, Franc Gubenšek, "Ammodytoxin and presynaptic neurotoxicity : invited talk", V: V Congreso International de Química e Ingeniería Química : Palacio de Convenciones de La Habana, Octubre 18-22,2004 : Havana International Conference Center, October 18th to 22nd, 2004, [S.l., S.n.], 2004. [COBISS.SI-ID 18576423]

30. Igor Križaj, Jernej Šribar, Nina Vardjan, Uroš Petrovič, Jože Pungerčar, Franc Gubenšek, "Presynaptic neurotoxicity of ammodytoxin, a snake venom phospholipase A[sub]2", V: 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, Marko Dolinar, ur., Igor Križaj, ur., Peter Maček, ur., Ljubljana, Jožef Stefan Institute, 2004, str. 19. [COBISS.SI-ID 18292775]

31. Tomaž Langerholc, Tina Zavašnik-Bergant, Vito Turk, Magnus Abrahamson, Janko Kos, "Unusual localization and inhibitory properties of cystatin F in U937 cells", V: 21st Winter School on Proteinases and their Inhibitors, Recent Developments : in Tiers, 25th-29th February, 2004, [S.l., s.n.], 2004, str. 45. [COBISS.SI-ID 18376743]

32. Tomaž Langerholc, Tina Zavašnik-Bergant, Vito Turk, Magnus Abrahamson, Janko Kos, "Unusual localization and inhibitory properties of cystatin F in U937 cells", V: Book of abstracts, 3rd Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 18-21, 2004, Tamara Lah T., ur., Gregor Serša, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2004, str. 79. [COBISS.SI-ID 18181159]

33. Tomaž Langerholc, Tina Zavašnik-Bergant, Vito Turk, Magnus Abrahamson, Janko Kos, "Inhibitory properties of cystatin F and its localisation in U937 cells", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 90. [COBISS.SI-ID 18479399]

34. Primož Meh, Miha Pavšič, Vito Turk, Antonio Baici, Brigita Lenarčič, "Concentration dependent activity of thyroglobulin type-1 domain of testican", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 93. [COBISS.SI-ID 18481447]

35. Primož Meh, Miha Pavšič, Vito Turk, Brigita Lenarčič, "Dual concentration-dependent activity of thyroglobulin type-1 domain of testican : specific inhibitor and a substrate of cathepsin L", V: 21st Winter School on Proteinases and their Inhibitors, Recent Developments : in Tiers, 25th-29th February, 2004, [S.l., s.n.], 2004, str. 48. [COBISS.SI-ID 18839591]

36. Marko Mihelič, Gregor Gunčar, Katja Galeša, Dušan Turk, "Is excluded interaction between cathepsin S and inhibitory fragment of p41 form of invariant chain confined only to humans?", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 73. [COBISS.SI-ID 18475047]

37. Adaleta Mulaomerović, Jasmina Berbić Fazlagić, Andreja Sekirnik, Tina Zavašnik-Bergant, Janko Kos, Lejla Begić, "Cathepsins X, S and cystatin C in sera of patients with B-cell lymphoma", V: Book of abstracts, 3rd Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 18-21, 2004, Tamara Lah T., ur., Gregor Serša, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2004, str. 86. [COBISS.SI-ID 18189607]

38. Kristina Orešić, Laura Andrews, Brooke Baker, Domenico Tortorella, "Down-regulation of MHC class I molecules by HCMV US2 and US11", V: Abstracts, 9th Symposium on Virus-Host Interactions, June 30th, 2004, New York, NY, USA, New York, New York Academy of Sciences, 4, str. 19. [COBISS.SI-ID 19204647]

39. Miha Pavšič, Vito Turk, Brigita Lenarčič, "Expression and characterization of thyroglobulin type 1 domain of testican-2", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 92. [COBISS.SI-ID 18479655]

40. Toni Petan, Petra Prijatelj, Gabriela Ivanovski, Igor Križaj, Franc Gubenšek, Jože Pungerčar, "Interfacial kinetic and binding properties of ammodytoxins : potent presynaptic neurotoxins and highly efficient enzymes", V: 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, Marko Dolinar, ur., Igor Križaj, ur., Peter Maček, ur., Ljubljana, Jožef Stefan Institute, 2004, str. 45. [COBISS.SI-ID 18293031]

41. Toni Petan, Petra Prijatelj, Gabriela Ivanovski, Igor Križaj, Franc Gubenšek, Jože Pungerčar, "Interfacial kinetic and binding properties of ammodytoxins, presynaptically neurotoxic secreted phospholipases A2", V: Commercial potential of toxins: developing toxins for applications in drug discovery and diagnostics : June 17-19, 2004, Kokra hotel, Brdo Estate Ljubljana, Slovenia, [S.l.], Yole Développment, European Technology Information Program, 2004. [COBISS.SI-ID 18316071]

42. Uroš Petrovič, Mojca Mattiazzi, Klara Repovi, Jernej Šribar, Maja Matis, Jasna Peter-Katalinić, Joseph L. DeRisi, Gregor Anderluh, Igor Križaj, Franc Gubenšek, "Yeast as a model to asses the molecular mechanism of action of a neurotoxic secretory phospholipase A[sup]2", V: Commercial potential of toxins: developing toxins for applications in drug discovery and diagnostics : June 17-19, 2004, Kokra hotel, Brdo Estate Ljubljana, Slovenia, [S.l.], Yole Développment, European Technology Information Program, 2004. [COBISS.SI-ID 18050521]

43. Uroš Petrovič, Mojca Mattiazzi, Klara Repovž, Jernej Šribar, Jasna Matis, Jasna Peter-Katalinić, Joseph L. DeRisi, Gregor Anderluh, Igor Križaj, Franc Gubenšek, "Yeast as a model to assess the molecular mechanism of action of a neurotioxic secretory phospholipase A[sub]2", V: 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, Marko Dolinar, ur., Igor Križaj, ur., Peter Maček, ur., Ljubljana, Jožef Stefan Institute, 2004, str. 47. [COBISS.SI-ID 18293287]

44. Ana Plemenitaš, Uroš Petrovič, Martina Turk, Alenka Gorjan, Nina Gunde-Cimerman, "Black yeast Hortaea werneckii : a new eukaryotic halophilic model organism", V: Extremophiles 2004, Washington, American Society for Microbiology, 2004, str. 49, [no.] 18. [COBISS.SI-ID 1367945]

45. Aleš Premzl, Janko Kos, "Cathepsin B in tumour progression and possible applicability of cathepsin B neutralising 2A2 monoclonal antibody in cancer tretment : invited talk", V: Book of abstracts, 3rd Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 18-21, 2004, Tamara Lah T., ur., Gregor Serša, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2004, str. 59. [COBISS.SI-ID 18295335]

46. Aleš Premzl, Janko Kos, "Neutralising monoclonal antibodeis as anti-cancer agents", V: Design of life : learning from nature : symposium handbook, 5th International EMBL PhD Students Symposium, 2-4 December 2004, Heidelberg, Germany, str. 81. [COBISS.SI-ID 18662695]

47. Petra Prijatelj, Marlène Charnay, Gabriela Ivanovski, Zala Jenko, Jože Pungerčar, Igor Križaj, Grazyna Faure, "Anticoagulant activity of ammodytoxin is the results of its binding to FXa - identification of the anticoagulant site of AtxA by site directed mutagenesis and surface plasmon resonance", V: 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, Marko Dolinar, ur., Igor Križaj, ur., Peter Maček, ur., Ljubljana, Jožef Stefan Institute, 2004, str. 50. [COBISS.SI-ID 18293543]

48. Petra Prijatelj, Zala Jenko, Toni Petan, Igor Križaj, Franc Gubenšek, Jože Pungerčar, "Surface residues in monomeric phospholipases A[sub]2 from viperid snakes important for their high presynaptic neurotoxicity", V: 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, Marko Dolinar, ur., Igor Križaj, ur., Peter Maček, ur., Ljubljana, Jožef Stefan Institute, 2004, str. 65. [COBISS.SI-ID 18294823]

49. Sabina Rabzelj, Vito Turk, Eva Žerovnik, "In vitro properties of the G4R mutant of human stefin B observed in EPM1", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 87. [COBISS.SI-ID 18478887]

50. Claudia C.A. Rizzi, Ivica Klemenčič, Boris Turk, (9 avtorjev), "The lysosomal peptidase cathepsin X bins heparan sulfate proteoglycans at cell surface", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 80. [COBISS.SI-ID 18478119]

51. Jerica Rozman Pungerčar, Dejan Caglič, Marko Dolinar, Dušan Turk, Vito Turk, Boris Turk, "The autocatalytic processing of procathepsin B is initiated by proenzyme activity and is accelerated by glycosaminoglycans", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 21. [COBISS.SI-ID 18468391]

52. Anna Sanders, Silva Giannini, Gareth Morgan, Jon Waltho, Eva Žerovnik, Jeremy Craven, Rosie Staniforth, "The rate-limiting step in the pathway of cystatin amyloid formation", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 42. [COBISS.SI-ID 18468903]

53. Nina Slapar, Borut Štrukelj, Kristina Gruden, "Cysteine proteases involved in the adaptation process of pest (Colorado potato beetle) to plant defence response", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 68. [COBISS.SI-ID 18474535]

54. Jernej Šribar, Alenka Čopič, Uroš Logonder, Jani Božič, Jernej Jorgačevski, Petra Prijatelj, Gregor Anderluh, Grazyna Faure, Franc Gubenšek, Igor Križaj, "Intracellular binding proteins of ammodytoxin", V: 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, Marko Dolinar, ur., Igor Križaj, ur., Peter Maček, ur., Ljubljana, Jožef Stefan Institute, 2004, str. 62. [COBISS.SI-ID 18293799]

55. Jernej Šribar, Petra Draškovič, Franc Gubenšek, Grazyna Faure, Igor Križaj, "Isolation and partial characterization of ammodytoxin-binding proteins from the serum of the long-nosed viper (Vipera amodytes ammodytes)", V: 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, Marko Dolinar, ur., Igor Križaj, ur., Peter Maček, ur., Ljubljana, Jožef Stefan Institute, 2004, str. 63. [COBISS.SI-ID 18294055]

56. Igor Štern, Shalu Patel, Marko Mihelič, Katja Galeša, Dejan Caglič, Dušan Turk, V. Denise Dear, Igor Bronstein, "Prion protein digested by cathepsin S leads to fibril formation", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 74. [COBISS.SI-ID 18475303]

57. Anita Štrekelj, Zala Jenko, Igor Križaj, Aleksandra Comino, Franc Gubenšek, Jože Pungerčar, "Fluorescenet labelling of ammodytoxin produced in bacteria", V: 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, Marko Dolinar, ur., Igor Križaj, ur., Peter Maček, ur., Ljubljana, Jožef Stefan Institute, 2004, str. 67. [COBISS.SI-ID 18295079]

58. Boris Turk, "Lysosomal pathways to apoptosis : role of papain-like cysteine proteases", V: 21st Winter School on Proteinases and their Inhibitors, Recent Developments : in Tiers, 25th-29th February, 2004, [S.l., s.n.], 2004, str. 70. [COBISS.SI-ID 18128679]

59. Dušan Turk, "Interactive user interfaces of MAIN 2004", V: 22nd European Crystallographic Meeting : 26-31 August 2004, Budapest, Hungary : programme book, [S.l., s.n.], 2004. [COBISS.SI-ID 18494503]

60. Dušan Turk, "MAIN in 2004 : model bulding at 100 residues per minute", V: 22nd European Crystallographic Meeting : 26-31 August 2004, Budapest, Hungary : programme book, [S.l., s.n.], 2004, str. s16. [COBISS.SI-ID 18494759]

61. Dušan Turk, "Selective, non-selective and excluding specificity of protein inhibitors targeting papain-like cysteine proteases", V: 29th FEBS Congress : 26 June - 1 July 2004, Warsaw, Poland, [S.l.], The Polish Biochemical Society, 2004, str. 91. [COBISS.SI-ID 18482983]

62. Dušan Turk, "MAIN in 2004 : model building at "100 residues per minute"", V: 3rd International Conference on Structural Genomics, ICSG 2004, 17-21 November 2004, Washington, USA : book of abstracts, [S.l., s.n.], 2006, str. 78. [COBISS.SI-ID 19843111]

63. Dušan Turk, "MAIN in 2004 : model bulding at 100 residues per minute", V: Annual Meeting of the American Crystalographic Association, ACA : July 17-22, Chicaho, Illinois, [S.l., s.n.], 2004. [COBISS.SI-ID 18494247]

64. Dušan Turk, "Roles of papain-like cathepins in immune system response : exclusive interactions as the other face of selectivity", V: Book of abstracts [and] programme, Thirteenth Slovenian-Croatian crystallographic meeting, Bovec, Slovenia, June 16-20, 2004, Andrej Pevec, ur., Anton Meden, ur., Ivan Leban, ur., Ljubljana, Lab. of Inorganic Chemistry, FKKT, UL, 2004, str. 18. [COBISS.SI-ID 18477351]

65. Dušan Turk, Marko Mihelič, Gregor Gunčar, Katja Galeša, Saša Jenko, "Roles of papain-like cathepins in immune system response : excluding interactions as the other face of selectivity", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 17. [COBISS.SI-ID 18468135]

66. Vito Turk, "Lysosomal cysteine proteases as key players in protein degradation", V: Abstracts : Annual Meeting [of] International Union for Biochemistry and Molecular Biology, 8th Congress, June 12 - June 16,2004, [S.l.], American Society for Biochemistry and Molecular Biology, str. C315. [COBISS.SI-ID 18988583]

67. Vito Turk, "Proteinaes : from function, structure and regulation to drug design", V: V Congreso International de Química e Ingeniería Química : Palacio de Convenciones de La Habana, Octubre 18-22,2004 : Havana International Conference Center, October 18th to 22nd, 2004, [S.l., S.n.], 2004. [COBISS.SI-ID 18988839]

68. Tina Zavašnik-Bergant, Janko Kos, "Inhibitor cystatic C - potential modulator of proteolytic capacity of human dendritic cells", V: Design of life : learning from nature : sumposium handbook, 5th International EMBL PHD Students Symposium, [Heidelberg, Germany, December 2-4, 2004], [S.l.], EMBL, str. 91. [COBISS.SI-ID 18837287]

69. Tina Zavašnik-Bergant, Adaleta Mulaomerović, Urška Repnik, Andreja Sekirnik, Tomaž Langerholc, Lejla Begić, Matjaž Jeras, Rastko Golouh, Vito Turk, Janko Kos, "Cystatin C in non-Hodgkin lymphoma patients : possible relation to anti-tumour immune response", V: Book of abstracts, 3rd Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 18-21, 2004, Tamara Lah T., ur., Gregor Serša, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2004, str. 35. [COBISS.SI-ID 18175271]

70. Tina Zavašnik-Bergant, Urška Repnik, Rok Romih, Matjaž Jeras, Vito Turk, Janko Kos, "Differentiation and maturation dependent content, localization and secretion of cystatin C in human dendritic cells", V: Programme & abstracts : 17-21 October, 2004, Brugge, Beligium, 8th International Symposium on Dendritic Cells, [S.l., s.n.], 2004, str. 139. [COBISS.SI-ID 18837031]

71. Eva Žerovnik, Manca Kenig, Sabina Rabzelj, Vito Turk, "Correlation between sequence and propensity to form amyloid-fibrils", V: Final program & book of abstracts, Xth International Symposium on Amyloid and amyloidosis from molecular dissection to therapeutics, Tours, Loire Valley, April 18-22, 2004, [S.l., s.n.], 2004, str. 41. [COBISS.SI-ID 18222119]

72. Eva Žerovnik, Miha Škarabot, Manca Kenig, Veronika Stoka, Maruša Pompe Novak, Magda Tušek-Žnidarič, Rosemary A. Staniforth, "Towards the mechanism of amyloid-fibril formation by human stefin B : a model system for other cystatins", V: Book of abstracts, 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004, Marko Dolinar, ur., Boris Turk, ur., Ljubljana, "Jožef Stefan" Institute, 2004, str. 43. [COBISS.SI-ID 18474023]

73. Vera Župunski, Dušan Kordiš, Franc Gubenšek, "Molecular evolution of Kunitz/BPTI protein family in snakes", V: 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, Marko Dolinar, ur., Igor Križaj, ur., Peter Maček, ur., Ljubljana, Jožef Stefan Institute, 2004, str. 80. [COBISS.SI-ID 18315047]

74. Vera Župunski, Dušan Kordiš, Franc Gubenšek, "Adaptive evolution in snake venom Kunitz/BPTI protein family", V: Genomes & evolution 2004 : [The Pennsylvania State University, University Park, Pennsylvania State University, Pennsylvania, June 17-20, 2004, [S.l.], Society for Molecular Biology and Evolution, American Genetic Association, 2004, str. 128. [COBISS.SI-ID 18315815]

1.13 Objavljeni povzetek strokovnega prispevka na konferenci

2. Katarina Cankar, Kristina Gruden, Magda Tušek-Žnidarič, Nataša Toplak, Maja Ravnikar, Jana Žel, "CaMV virus detection with real-time PCR - identification of false positive results in 35S screening for genetically modified organisms (GMOs)", V: Symposium abstracts - oral presentations, 1st International qPCR Symposium & Application Workshop, 3rd-6th March 2004 in Freising-Weihenstephan, 2004, str. 26-27. [COBISS.SI-ID 17688793]

3. Kristina Gruden, Matjaž Hren, Maruša Pompe Novak, Maja Ravnikar, "Application of real-time PCR for quantitative determination of transgene copy number in transformed CHO cell lines", V: Symposium abstracts - poster presentations, 1st International qPCR Symposium & Application Workshop, 3rd-6th March 2004 in Freising-Weihenstephan, 2004, str. 26-27. [COBISS.SI-ID 17690073]

4. Maja Kovač, Darja Milovanovič Jarh, Axel Müller, Hana Krečič Stres, Maruša Pompe Novak, Kristina Gruden, Maja Ravnikar, "Phytohormones in response of potato plants to virus infection", V: Conference handbook : IPGSA conference 2004, 18th International Conference on Plant Growth Substances, 20-24 September 2004, Canberra, [S.l., s.n., 2004], str. 107. [COBISS.SI-ID 18739161]

5. Aleš Premzl, "Vloga zunajceličnega in znotrajceličnega katepsina B pri invaziji in ožiljanju tumorjev", V: 34. Krkine nagrade, 13. mednarodni simpozij = 13th International Symposium, Novo mesto, Slovenija, 23. in 24. oktober 2003, Natalija Vitezić, ur., Novo mesto, Krka, 2004, str. 52. [COBISS.SI-ID 18662183]

6. Aleš Premzl, Janko Kos, "Cathepsin B in tumour progression and possible applicability of cathepsin B neutralising 2A2 monoclonal antibody in cancer treatment", V: Book of abstracts, 3rd Conference on Experimental and Translational Oncology, Kranjska gora, Slovenia, March, 18-21, 2004, Tamara Lah T., ur., Gregor Serša, ur., Janko Kos, ur., Ljubljana, Association of Radiology and Oncology, 2004, str. 59. [COBISS.SI-ID 17574873]

7. Nataša Toplak, Veronika Okršlar, Darja Stanič Racman, Jana Žel, Kristina Gruden, "Determining the expression level of transgene in transformed plants - method of choice?", V: Symposium abstracts - poster presentations, 1st International qPCR Symposium & Application Workshop, 3rd-6th March 2004 in Freising-Weihenstephan, 2004, str. 31-32. [COBISS.SI-ID 17690329]

1.16 Samostojni znanstveni sestavek ali poglavje v monografski publikaciji

2. Saša Jenko, Gregor Gunčar, Dušan Turk, Eva Žerovnik, "Amiloidne fribrile stefina A in B", V: Znanstveno delo podiplomskih študentov v Sloveniji - "publish or perish!" : e-knjiga, Martin Klanjšek, ur., Ljubljana, Društvo mladih raziskovalcev Slovenije, 2004, str. 177-183. [COBISS.SI-ID 18907175]

3. Boris Turk, Dušan Turk, Iztok Dolenc, Vito Turk, "Dipeptidyl-peptidase I", V: Handbook of proteolytic enzymes, Alan J. Barrett, ur., Neil D. Rawlings, ur., J. F. Woessner, ur., 2nd ed., Amsterdam [etc.], Elsevier Academic Press, cop. 2004, str. 1192-1196. [COBISS.SI-ID 18604583]

1.17 Samostojni strokovni sestavek ali poglavje v monografski publikaciji

1.20 Predgovor, spremna beseda

2. Veronika Stoka, Eva Žerovnik, "Neurobiology/nevrobiologija : introduction/uvod", V: Kognitivna znanost : zbornik A 7. mednarodne multi-konference Informacijska družba IS 2004, 9. do 15. oktober 2004 : proceedings A of the 7th International Multi-Conference Information Society IS 2004, 9-15th October 2004, Ljubljana, Slovenia, (Informacijska družba), Andrej Ule, ur., Matjaž Gams, ur., Grega Repovš, ur., Ljubljana, Institut "Jožef Stefan", 2004, str. 72-74. [COBISS.SI-ID 18685991]

MONOGRAFIJE IN DRUGA ZAKLJUČENA DELA

2.03 Univerzitetni ali visokošolski učbenik z recenzijo

2.08 Doktorska disertacija

2.13 Elaborat, predštudija, študija

2.24 Patent

IZVEDENA DELA (DOGODKI)

3.14 Predavanje na tuji univerzi

2. Aleš Premzl, The rolre of cathepsin B in tumor progression and possible applicability of cathepsin B neutralizing 2A2 monoclonal antibody in cancer tretment : invited talk, Zürich, Biochemischen Institute der Universität Zürich, 10 Juni 2004. [COBISS.SI-ID 18295591]

3. Boris Turk, Apoptotic pathways - involvement of lysosomal proteases : invited talk, Strasbourg, Université Louis Pasteur, Laboratoire d'enzymologie, 11 Feb. 2004. [COBISS.SI-ID 18128935]

4. Boris Turk, Cysteine cathepsins in life and death : invited talk, Barcelona, Spain, Universitat Autònoma de Barcelona, Institut de Biotecnologia i de Biomedicina "Vicent Villar i Palasí", 19 Nov. 2004. [COBISS.SI-ID 18661159]

5. Boris Turk, Cysteine cathepsins in life and death : invited talk, Tokushima, Japan, Tokushima Bunri University, Institute for Health Sciences, 22 Sep.2004. [COBISS.SI-ID 18542119]

6. Boris Turk, Cysteine cathepsins in life and death : invited talk, Tokyo, Japan, University of Tokyo, Department of Life Sciences, Graduate School of Arts and Sciences, 28 Sep.2004. [COBISS.SI-ID 18541607]

7. Boris Turk, Cysteine cathepsins in life and disease : invited talk, Tokyo, Japan, The Tokyo Metropolitan Institute of Medical Sciences, Encymatic Regulation for Cell Functions, 28 Sep.2004. [COBISS.SI-ID 18541095]

8. Boris Turk, Cysteine proteinases and their inhibitors - structure, function and antigen presentation : invited talk, Saitama, Japan, Saitama Medical School, 27 Sep.2004. [COBISS.SI-ID 18542631]

9. Boris Turk, Life and death with cysteine cathepsins : invited talk, Tokushima, Japan, University of Tokushima, Institute for Enzyme Resarch, 22 Sep.2004. [COBISS.SI-ID 18541351]

10. Boris Turk, Lysosomal proteases and apoptosis : invited talk, Gent, Belgium, University of Gent, Department for Molecular Biomedical Research, 25 June 2004. [COBISS.SI-ID 18297895]

11. Boris Turk, Papain-like cathepsins in life and death : invited talk, Uppsala, Sweden, Uppsala University, Division of Chemistry, Department of Biochemistry, 15 April 2004. [COBISS.SI-ID 18202663]

12. Dušan Turk, Automatic structure solution with MAIN : invited talk, Berkeley, California, UC Berkeley, 27 July 2004. [COBISS.SI-ID 18495015]

13. Dušan Turk, MAIN in 2004 : model building at 100 residues/minute : invited talk, West Lafayette, Indiana, USA, Purdue University, 16 July 2004. [COBISS.SI-ID 18495527]

14. Dušan Turk, Roles of papain-like cathepsins in immune system response : excluding interactions as the other face of selectivity : invited talk, San Francisco, California, UC San Francisco, 23 July 2004. [COBISS.SI-ID 18495271]

15. Dušan Turk, Strukturna biologija cisteinskih proteaza : pregled metoda i interpretacija 3D strukture : vabljeno predavanje, Tuzla, Bosna in Hercegovina, Tuzla University, July 2004. [COBISS.SI-ID 18495783]

16. Vito Turk, Cysteine proteases : between structure and physiological role : invited talk, Tokio, Japan, Juntendo University School of Medicine, 7 Dec. 2004. [COBISS.SI-ID 18983463]

17. Vito Turk, Cysteine proteases : from structure, biology to drug design : invited talk, Seoul, Korea, Yonsei University College of Science, Department of Biochemistry, 30. Nov. 2004. [COBISS.SI-ID 18983207]

18. Vito Turk, Lysosomal cathepsins : from structure to biology : invited talk, Wilmington, USA, Nemours Children's Clinic, Department of Biomedical Research, 1. Nov. 2004. [COBISS.SI-ID 18982951]

19. Vito Turk, Lysosomal cysteine protease - on the main stage in biology : invited talk, Manhattan, USA, Kansas State University, 1. Nov. 2004. [COBISS.SI-ID 18982695]

20. Vito Turk, Lysosomal cysteine protease : structure and physiological aspects : invited talk, New York, USA, State University University of New York ay Stony Brook, Department of Biochemistry and Cell Biology, 10 June 2004. [COBISS.SI-ID 18982439]

21. Eva Žerovnik, Folding and amyloid fibril formation of stefins : solvent, TFE and T effects, study of a series of chimeras : invited talk, Gdansk, Poland, University of Gdansk, Faculty of Chemstry, 15 Jan. 2004. [COBISS.SI-ID 18036263]

22. Eva Žerovnik, Folding and amyloid fibril formation of stefins : solvent, TFE and T effects, study of a series of chimeras : invited talk, Sheffield, UK, University of Sheffield, Department of Molecular Biology & Biotechnology, 13 Jan. 2004. [COBISS.SI-ID 17997095]

23. Eva Žerovnik, Modelne študije amiloidnih proteinov in vitro : povezava s konformacijskimi boleznimi : vabljeno predavanje, Ljubljana, SINAPSA, Slovensko društvo za nevroznanost, 26.2.2004. [COBISS.SI-ID 18921767]

3.15 Prispevek na konferenci brez natisa

3.16 Vabljeno predavanje na konferenci brez natisa

2. Boris Turk, Lysosomal cathepsins : invited talk presented at Muscular Dystrophy Group Workshop, 25 September 2004, Tokyo, 2004. [COBISS.SI-ID 18542375]

3.25 Druga izvedena dela

2. President of the Organizing committee: Franc Gubenšek, 15th European Symposium on Animal, Plant and Microbial Toxins, June 19-23,2004, Brdo (Kranj), 2004. [COBISS.SI-ID 18706215]

3. Members of the Organizing committee: Franc Gubenšek, Igor Križaj, Marko Dolinar, Gregor Anderluh, Uroš Petrovič, Jože Pungerčar, Kristina Sepčić, 15th European Symposium on Animal, Plant and Microbial Toxins, Brdo (Kranj), Slovenia, June 19-23, 2004, 2004. [COBISS.SI-ID 18292519]

4. Član Programskega odbora: Igor Križaj, Jubilejni 10. Slovenski kemijski dnevi 2004, 23. in 24. september 2004, Maribor, 2004. [COBISS.SI-ID 18575399]

SEKUNDARNO AVTORSTVO

Urednik

2. 4th International Conference on Cysteine Proteinases and Their Inhibitors, Portorož, Slovenia, September, 11-15, 2004: Marko Dolinar, ur., Boris Turk, ur., Book of abstracts, Ljubljana, "Jožef Stefan" Institute, 2004. [COBISS.SI-ID 215376384]

Mentor pri doktorskih disertacijah

Mentor pri magistrskih delih

Mentor pri diplomskih delih

Komentor pri doktorskih disertacijah

Komentor - drugo

Član komisije za zagovor

2. Anton Poliakov, Peptide-based inhibitors of hepatitis C virus NS3 serine protease : [disertation], (Acta universitatis Upsaliensis, 952), Uppsala, [A. Poliakov], 2004. [COBISS.SI-ID 18246951]